Package that provides tools for brain Lithium MRI pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

limri.regtools.apply_transforms(fixed_file, moving_file, transformlist, filename)[source]¶

Apply a transform list to map an image from one domain to another.

Parameters

fixed_file : str

fixed image defining domain into which the moving image is transformed.

moving_file : str

moving image to be mapped to fixed space.

transformlist : list of str

list of transforms generated by ants.registration where each transform is a filename.

filename : str

the name of the transformed image.