Package that provides tools for brain Lithium MRI pre-processing.

Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the gallery for the big picture.

limri.normtools.fslreorient2std(input_image, output_image, save_trf=True)[source]¶

Reorient an image to match the approximate orientation of the standard template image (MNI152).

Parameters

input_image : str

the image to reorient.

output_image : str

the reoriented image.

save_trf : bool, default True

opttionally save the reorientation matrix.